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CRISPR co-depency top hits obscured by newly added screens
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13
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311
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May 19, 2026
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Announcing the 25Q3 Release
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1
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1236
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October 2, 2025
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Bulk download of 25Q2 files
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1
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712
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September 5, 2025
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Announcing the 26Q1 Release
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1
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808
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April 2, 2026
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Drug-Target validation using CRISPR and PRISM repurposing dataset
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6
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266
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July 1, 2025
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comparison between raw counts and log TPM values
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6
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207
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July 29, 2025
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Best practices for interpreting copy number values in CN WGS data 25Q3
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6
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174
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February 13, 2026
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Random forest code
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2
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192
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July 1, 2025
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Availability of DepMap 25Q2 On FigShare
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1
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159
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August 18, 2025
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NF2 damaging mutations
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5
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96
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March 16, 2026
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How to compare essential genes in several cell lines of certain lineage at once?
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1
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140
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June 26, 2025
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Missing CCLE 2019 mutation data download?
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4
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91
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April 29, 2026
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How to label the cells in DepMap 2.0
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2
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103
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July 15, 2025
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DepMap 25Q3 vs 25Q2 release: what should I trust?
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1
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120
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January 5, 2026
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Cell line mutation data seems to have changed?
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2
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82
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August 28, 2025
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AUC and Correlation coefficient
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1
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108
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July 24, 2025
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Changed gene dependencies
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2
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85
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October 6, 2025
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Read ids between SRA fastq and AWS open data bam
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5
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76
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March 4, 2026
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Access to unfiltered cell line VCF files?
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1
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98
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June 30, 2025
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GISTIC2 Analysis of cBioPortal Segment-Level CN Data
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1
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95
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August 5, 2025
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WGS data access
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1
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92
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June 23, 2025
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How is miRNA expression normalised?
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0
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122
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August 29, 2025
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Predicted CRISPR KO gene score (precursor to Predictability score)
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2
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73
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August 19, 2025
|
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DepMap 26Q2 release
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1
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91
|
January 29, 2026
|
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RNA-seq fastq download from 25Q2
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1
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89
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September 11, 2025
|
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BAM files from RNA seq
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1
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88
|
June 13, 2025
|
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Mismatch of LoF information
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1
|
100
|
September 25, 2025
|
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Batch correction best practices for DepMap omics expression data 25Q3
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2
|
75
|
February 5, 2026
|
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Aneuploidy Score in DepMap
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3
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66
|
February 13, 2026
|
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Unexpected error. If you get this error consistently, please contact us with a screenshot and the actions that lead to this error
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3
|
56
|
November 3, 2025
|
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cell line selector loading......
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3
|
50
|
July 11, 2025
|
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comparison of different releases
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2
|
62
|
September 19, 2025
|
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Request to include batch information for all datasets
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2
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62
|
August 15, 2025
|
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OncogeneHighImpact
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1
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72
|
December 8, 2025
|
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Label cell lines based on TP53 mutation
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1
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69
|
September 8, 2025
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Culture medium question about pyruvate
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3
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58
|
March 31, 2026
|
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Replicating 25Q2 / 25Q3 Chronos Gene Effect Scores
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2
|
56
|
April 29, 2026
|
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Request about treatment metadata for "PRISM Repurposing Public 24Q2" release
|
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1
|
66
|
September 26, 2025
|
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CRISPRGeneDependency file integrated both Broad and Sanger datasets?
|
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2
|
55
|
January 9, 2026
|
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Oncogenic relevant fusions in cell lines
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1
|
72
|
March 9, 2026
|
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comparison between raw counts and log TPM values
|
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0
|
84
|
July 10, 2025
|
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is CRIPSRGeneEffect X and Y chromosome aware
|
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1
|
64
|
February 12, 2026
|
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Question about the naming rule for drugs in Custom Downloads data
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1
|
59
|
June 26, 2025
|
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Y chromosome linked genes have an unusually high CRISPR Gene Effect (> 0)
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1
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63
|
February 12, 2026
|
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mutation query
|
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1
|
56
|
September 23, 2025
|
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Reproducing ScreenGeneEffectUncorrected and CRISPRGeneEffectUncorrected from 25Q3
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2
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49
|
April 7, 2026
|
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Multiple omics expression profiles
|
|
1
|
58
|
February 13, 2026
|
|
Has Chronos2 been adopted in DepMap 25Q3 for gene-effect estimation?
|
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1
|
56
|
January 6, 2026
|
|
Antibiotic doses?
|
|
1
|
50
|
July 24, 2025
|
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Model level data for other omics (RPPA, Mass Spec and Methylation data)
|
|
1
|
47
|
August 8, 2025
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