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CRISPR co-depency top hits obscured by newly added screens
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10
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215
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April 9, 2026
|
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Announcing the 25Q3 Release
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1
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1179
|
October 2, 2025
|
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Announcing the 25Q2 Release
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2
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1060
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June 30, 2025
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Drug-Target validation using CRISPR and PRISM repurposing dataset
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6
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246
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July 1, 2025
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Bulk download of 25Q2 files
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1
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402
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September 5, 2025
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comparison between raw counts and log TPM values
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6
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197
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July 29, 2025
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Announcing the 26Q1 Release
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1
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507
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April 2, 2026
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How do we interpret the ssGSEA scores in DepMap?
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1
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266
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May 23, 2025
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Best practices for interpreting copy number values in CN WGS data 25Q3
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6
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144
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February 13, 2026
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How to Best Analyze DepMap Data for Identifying Cancer Dependencies?
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0
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309
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May 23, 2025
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Random forest code
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2
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186
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July 1, 2025
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Data "PRISM Repurposing Public 24Q2" in Custom Downloads
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1
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172
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May 23, 2025
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Availability of DepMap 25Q2 On FigShare
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1
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141
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August 18, 2025
|
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How to compare essential genes in several cell lines of certain lineage at once?
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1
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124
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June 26, 2025
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DepMap portal cell line mutation,
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2
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102
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May 5, 2025
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Data after CRISPR-Cas9 screening
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2
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101
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June 9, 2025
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NF2 damaging mutations
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5
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78
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March 16, 2026
|
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Missing CCLE 2019 mutation data download?
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4
|
75
|
April 29, 2026
|
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How to label the cells in DepMap 2.0
|
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2
|
95
|
July 15, 2025
|
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Error in Custom Analysis: Omics Signatures Public
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2
|
54
|
June 6, 2025
|
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DepMap 25Q3 vs 25Q2 release: what should I trust?
|
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1
|
115
|
January 5, 2026
|
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AUC and Correlation coefficient
|
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1
|
104
|
July 24, 2025
|
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Changed gene dependencies
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2
|
79
|
October 6, 2025
|
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Access to unfiltered cell line VCF files?
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1
|
94
|
June 30, 2025
|
|
Cell line mutation data seems to have changed?
|
|
2
|
73
|
August 28, 2025
|
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GISTIC2 Analysis of cBioPortal Segment-Level CN Data
|
|
1
|
88
|
August 5, 2025
|
|
DepMap 26Q2 release
|
|
1
|
85
|
January 29, 2026
|
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WGS data access
|
|
1
|
85
|
June 23, 2025
|
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Mismatch of LoF information
|
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1
|
89
|
September 25, 2025
|
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BAM files from RNA seq
|
|
1
|
80
|
June 13, 2025
|
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Predicted CRISPR KO gene score (precursor to Predictability score)
|
|
2
|
63
|
August 19, 2025
|
|
NCI-H854 Oncotree cancer type
|
|
1
|
82
|
May 23, 2025
|
|
RNA-seq fastq download from 25Q2
|
|
1
|
75
|
September 11, 2025
|
|
Request to include batch information for all datasets
|
|
2
|
61
|
August 15, 2025
|
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Read ids between SRA fastq and AWS open data bam
|
|
5
|
60
|
March 4, 2026
|
|
Unexpected error. If you get this error consistently, please contact us with a screenshot and the actions that lead to this error
|
|
3
|
52
|
November 3, 2025
|
|
comparison of different releases
|
|
2
|
58
|
September 19, 2025
|
|
PureCN Custom Analysis error
|
|
2
|
58
|
June 6, 2025
|
|
Label cell lines based on TP53 mutation
|
|
1
|
62
|
September 8, 2025
|
|
cell line selector loading......
|
|
3
|
43
|
July 11, 2025
|
|
OncogeneHighImpact
|
|
1
|
62
|
December 8, 2025
|
|
Aneuploidy Score in DepMap
|
|
3
|
48
|
February 13, 2026
|
|
comparison between raw counts and log TPM values
|
|
0
|
80
|
July 10, 2025
|
|
Request about treatment metadata for "PRISM Repurposing Public 24Q2" release
|
|
1
|
55
|
September 26, 2025
|
|
Culture medium question about pyruvate
|
|
3
|
46
|
March 31, 2026
|
|
Y chromosome linked genes have an unusually high CRISPR Gene Effect (> 0)
|
|
1
|
58
|
February 12, 2026
|
|
mutation query
|
|
1
|
51
|
September 23, 2025
|
|
Replicating 25Q2 / 25Q3 Chronos Gene Effect Scores
|
|
2
|
44
|
April 29, 2026
|
|
is CRIPSRGeneEffect X and Y chromosome aware
|
|
1
|
58
|
February 12, 2026
|
|
Antibiotic doses?
|
|
1
|
50
|
July 24, 2025
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