|
is CRIPSRGeneEffect X and Y chromosome aware
|
|
1
|
43
|
February 12, 2026
|
|
Batch correction best practices for DepMap omics expression data 25Q3
|
|
2
|
19
|
February 5, 2026
|
|
Change to fusion calls in 2025 releases?
|
|
1
|
10
|
February 5, 2026
|
|
Are sequences for promoter regions available?
|
|
2
|
8
|
February 2, 2026
|
|
Has Chronos2 been adopted in DepMap 25Q3 for gene-effect estimation?
|
|
1
|
38
|
January 6, 2026
|
|
In 25Q3, mutation annotation vep --distance
|
|
1
|
36
|
December 8, 2025
|
|
Missing Values in the Promoter Methylation File
|
|
1
|
37
|
October 27, 2025
|
|
RNA-seq fastq download from 25Q2
|
|
1
|
53
|
September 11, 2025
|
|
Label cell lines based on TP53 mutation
|
|
1
|
58
|
September 8, 2025
|
|
Request to include batch information for all datasets
|
|
2
|
58
|
August 15, 2025
|
|
Model level data for other omics (RPPA, Mass Spec and Methylation data)
|
|
1
|
41
|
August 8, 2025
|
|
Batch corrected counts data
|
|
2
|
137
|
April 30, 2025
|
|
Normalization -TMM
|
|
3
|
114
|
April 16, 2025
|
|
Availability of of RNA-seq bigwig files
|
|
2
|
57
|
April 7, 2025
|
|
24Q2 - PureCN Integer Copy Number for Chr X and Y
|
|
3
|
174
|
April 6, 2025
|
|
WGS MAF file
|
|
1
|
25
|
March 6, 2025
|
|
Metadata for ssGSEA pathways
|
|
3
|
80
|
March 4, 2025
|
|
Where can I find the raw genomics sequencing data?
|
|
15
|
4520
|
February 18, 2025
|
|
Phospho-Proteomics data accessibility issue
|
|
3
|
145
|
February 6, 2025
|
|
What exactly is the SegmentMean in OmicsCNSegmentsProfile.csv?
|
|
0
|
84
|
February 3, 2025
|
|
Clarification on Negative Values in Log-Transformed Gene Expression Data
|
|
1
|
276
|
January 30, 2025
|
|
OmicsSomaticMutations.csv, multiple mutation rows of the same cell-line and the same gene
|
|
2
|
126
|
January 10, 2025
|
|
Aneuploidy score
|
|
1
|
160
|
January 6, 2025
|
|
Absolute copy number
|
|
1
|
231
|
December 20, 2024
|
|
Copy_Number_(Absolute) and OmicsAbsoluteCNGene are Different
|
|
1
|
214
|
October 24, 2024
|
|
Need File with gene size or FPKM for CCLE RNA expression
|
|
4
|
451
|
September 25, 2024
|
|
Accessing raw sequencing data
|
|
8
|
5906
|
September 8, 2024
|
|
Which one of the expression data is proper for machine learning?
|
|
4
|
307
|
September 4, 2024
|
|
LS180 (ACH-000957) mutations are different between 20Q1 and 23Q4
|
|
1
|
48
|
August 19, 2024
|
|
LMFI(log2 median fluorescence intensity values)
|
|
0
|
69
|
July 21, 2024
|
