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Cell line annotations
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1
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46
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January 13, 2025
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How can I obtain DepMap cell lines?
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0
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58
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November 17, 2024
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Dataset heatmap
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1
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37
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July 19, 2024
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Contrasting Gene Effects between RNAi and CRISPR of CCN4
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1
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36
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September 4, 2024
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How can I access genomic files?
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0
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54
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December 11, 2024
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Error in downloading"CRISPRGeneDependency.csv"24Q2
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2
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29
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October 11, 2024
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Unable to download anything from dep,ap
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2
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29
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August 30, 2024
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WGS data
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1
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37
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November 20, 2024
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Normalization -TMM
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3
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33
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April 16, 2025
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GPX4 and WWTR1 CRISPR LRT values missing
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0
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52
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June 11, 2024
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Problem to map drug info to 24Q2_Extended_Primary_Data_Matrix
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1
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37
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February 26, 2025
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SVs, noncoding mutations for CCLE data
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1
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35
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October 23, 2024
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Discrepancy between two damaging mutation file from 23Q4
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1
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34
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October 4, 2024
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Why isn't all of the cell line annotation data in one place?
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1
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33
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December 20, 2024
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Mesenchymal models
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1
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33
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March 24, 2025
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Ensembl, Gencode versions for DepMap data
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1
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40
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October 23, 2024
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IC50 values in PRISM Repurposing 19Q4: Raw or Logarithmic?
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0
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44
|
November 17, 2024
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Details of CRISPR experiment: ScreenSequenceMap.csv
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1
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30
|
March 7, 2025
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What's the genome version and gene annotation file used for Depmap bulk RNA-Seq expression estimation?
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1
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31
|
November 20, 2024
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DepMap Quarterly Release Notes
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0
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46
|
September 9, 2024
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Drug screen data is not availbale or is it chnaged the way we used to access it
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2
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29
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March 20, 2025
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Single gene comparison between several cell lines
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0
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39
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September 19, 2024
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CRISPRGeneEffect chromosome arm correction (AC-Chronos)
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1
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28
|
October 11, 2024
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ScreenMedianEssentialDepletion pushes off predictability tile
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1
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28
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July 19, 2024
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Availability of RNA-seq data after drug treatment
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1
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26
|
April 1, 2025
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Investigate the expression level of a gene in defined groups
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1
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24
|
March 7, 2025
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Omic signatures discrepancies
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1
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34
|
January 30, 2025
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Comparison between two cell lines
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1
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24
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December 20, 2024
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Expression Controls
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1
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23
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August 2, 2024
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Confirming OmicsCNGene.csv "NaN" Interpretations/Assumptions on the X and Y Chromosome
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1
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25
|
November 12, 2024
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GDSC1 and GDSC2 AUC data
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0
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32
|
January 16, 2025
|
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Metadata for ssGSEA pathways
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3
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19
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March 4, 2025
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custom gene list download
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0
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31
|
June 29, 2024
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Running the DepMap data explorer v2 UI locally
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1
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25
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July 19, 2024
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Availability of of RNA-seq bigwig files
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2
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21
|
April 7, 2025
|
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Is the raw RNAseq available for download from cells released after 2019?
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1
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39
|
March 7, 2025
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Clarification on Y-axis height within the same tumor type in expression plot
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1
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22
|
October 18, 2024
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LMFI(log2 median fluorescence intensity values)
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0
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34
|
July 21, 2024
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Row names in the OmicsExpressionTranscripts file
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2
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21
|
March 13, 2025
|
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Genes that overlap with segmental duplication regions and/or are flagged by repeatMasker are masked in this matrix
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2
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20
|
October 31, 2024
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The web page cannot be displayed properly
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2
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22
|
September 25, 2024
|
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PRISM Batch effect
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0
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29
|
July 19, 2024
|
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LS180 (ACH-000957) mutations are different between 20Q1 and 23Q4
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1
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22
|
August 19, 2024
|
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Chemical structures for compounds in PRISM screen
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0
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32
|
October 19, 2024
|
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error in custom analysis
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1
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21
|
April 11, 2025
|
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EGFR hotspot mutations, custom downloads
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1
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20
|
July 26, 2024
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Cell Line Selection for CRISPR Screen
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0
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24
|
March 23, 2025
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ERCC spike-ins in RNAseq data
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0
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27
|
September 23, 2024
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12015 genes with protein data
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0
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27
|
August 19, 2024
|
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Unable to open anything
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1
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21
|
February 27, 2025
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