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RNA-seq fastq download from 25Q2
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1
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3
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September 11, 2025
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Label cell lines based on TP53 mutation
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1
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7
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September 8, 2025
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Request to include batch information for all datasets
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2
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33
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August 15, 2025
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Model level data for other omics (RPPA, Mass Spec and Methylation data)
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1
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26
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August 8, 2025
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Batch corrected counts data
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2
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64
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April 30, 2025
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Normalization -TMM
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3
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67
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April 16, 2025
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Availability of of RNA-seq bigwig files
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2
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33
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April 7, 2025
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24Q2 - PureCN Integer Copy Number for Chr X and Y
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3
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132
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April 6, 2025
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WGS MAF file
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1
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14
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March 6, 2025
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Metadata for ssGSEA pathways
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3
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39
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March 4, 2025
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Where can I find the raw genomics sequencing data?
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15
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4197
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February 18, 2025
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Phospho-Proteomics data accessibility issue
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3
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78
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February 6, 2025
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What exactly is the SegmentMean in OmicsCNSegmentsProfile.csv?
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0
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39
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February 3, 2025
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Clarification on Negative Values in Log-Transformed Gene Expression Data
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1
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169
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January 30, 2025
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OmicsSomaticMutations.csv, multiple mutation rows of the same cell-line and the same gene
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2
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74
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January 10, 2025
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Aneuploidy score
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1
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106
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January 6, 2025
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Absolute copy number
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1
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177
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December 20, 2024
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Copy_Number_(Absolute) and OmicsAbsoluteCNGene are Different
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1
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158
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October 24, 2024
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Need File with gene size or FPKM for CCLE RNA expression
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4
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391
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September 25, 2024
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Accessing raw sequencing data
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8
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5734
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September 8, 2024
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Which one of the expression data is proper for machine learning?
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4
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278
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September 4, 2024
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LS180 (ACH-000957) mutations are different between 20Q1 and 23Q4
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1
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28
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August 19, 2024
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LMFI(log2 median fluorescence intensity values)
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0
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44
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July 21, 2024
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Variants reported in OmicsSomaticMutations data
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1
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48
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July 8, 2024
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Dataset for abundance of transcripts?
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1
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142
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April 18, 2024
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Proteomics vs Public expression data
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0
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193
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April 3, 2024
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Differential analysis on gene expression data
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4
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551
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March 25, 2024
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Repeated uniprot accesions and weird qvalues of proteomic data in the analysis tool
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1
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194
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March 20, 2024
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How to mapping the sample IDs in the RNA-Seq RSEM count file to the Model file or cell line names?
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1
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203
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March 12, 2024
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How to find a specific analysis
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1
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162
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March 12, 2024
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