|
Normalization -TMM
|
|
3
|
25
|
April 16, 2025
|
|
Availability of of RNA-seq bigwig files
|
|
2
|
20
|
April 7, 2025
|
|
24Q2 - PureCN Integer Copy Number for Chr X and Y
|
|
3
|
91
|
April 6, 2025
|
|
WGS MAF file
|
|
1
|
11
|
March 6, 2025
|
|
Metadata for ssGSEA pathways
|
|
3
|
19
|
March 4, 2025
|
|
Where can I find the raw genomics sequencing data?
|
|
15
|
3924
|
February 18, 2025
|
|
Phospho-Proteomics data accessibility issue
|
|
3
|
35
|
February 6, 2025
|
|
What exactly is the SegmentMean in OmicsCNSegmentsProfile.csv?
|
|
0
|
21
|
February 3, 2025
|
|
Clarification on Negative Values in Log-Transformed Gene Expression Data
|
|
1
|
96
|
January 30, 2025
|
|
OmicsSomaticMutations.csv, multiple mutation rows of the same cell-line and the same gene
|
|
2
|
42
|
January 10, 2025
|
|
Aneuploidy score
|
|
1
|
62
|
January 6, 2025
|
|
Absolute copy number
|
|
1
|
115
|
December 20, 2024
|
|
Copy_Number_(Absolute) and OmicsAbsoluteCNGene are Different
|
|
1
|
99
|
October 24, 2024
|
|
Need File with gene size or FPKM for CCLE RNA expression
|
|
4
|
358
|
September 25, 2024
|
|
Accessing raw sequencing data
|
|
8
|
5489
|
September 8, 2024
|
|
Which one of the expression data is proper for machine learning?
|
|
4
|
246
|
September 4, 2024
|
|
LS180 (ACH-000957) mutations are different between 20Q1 and 23Q4
|
|
1
|
21
|
August 19, 2024
|
|
LMFI(log2 median fluorescence intensity values)
|
|
0
|
34
|
July 21, 2024
|
|
Variants reported in OmicsSomaticMutations data
|
|
1
|
43
|
July 8, 2024
|
|
Dataset for abundance of transcripts?
|
|
1
|
136
|
April 18, 2024
|
|
Proteomics vs Public expression data
|
|
0
|
179
|
April 3, 2024
|
|
Differential analysis on gene expression data
|
|
4
|
447
|
March 25, 2024
|
|
Repeated uniprot accesions and weird qvalues of proteomic data in the analysis tool
|
|
1
|
188
|
March 20, 2024
|
|
How to mapping the sample IDs in the RNA-Seq RSEM count file to the Model file or cell line names?
|
|
1
|
198
|
March 12, 2024
|
|
How to find a specific analysis
|
|
1
|
151
|
March 12, 2024
|
|
RNA-seq paired with CRISPR screen data?
|
|
1
|
155
|
March 5, 2024
|
|
CCLE_expression data values are different
|
|
1
|
137
|
January 30, 2024
|
|
Pre-computed association: Proteomics
|
|
1
|
111
|
January 30, 2024
|
|
Absence of RPE1 cell line information in DepMap 23Q2
|
|
0
|
121
|
January 5, 2024
|
|
CCLE RNAseq raw counts for all ~1300 lines
|
|
3
|
768
|
November 27, 2023
|
