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What's the genome version and gene annotation file used for Depmap bulk RNA-Seq expression estimation?
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1
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1
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November 20, 2024
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Cell viability data
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0
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1
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November 20, 2024
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IC50 values in PRISM Repurposing 19Q4: Raw or Logarithmic?
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0
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10
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November 17, 2024
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Stable URL for current release files
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0
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4
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November 17, 2024
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Problem with Copy Number data
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2
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28
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November 7, 2024
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Genes that overlap with segmental duplication regions and/or are flagged by repeatMasker are masked in this matrix
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2
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9
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October 31, 2024
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Copy_Number_(Absolute) and OmicsAbsoluteCNGene are Different
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1
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30
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October 24, 2024
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SVs, noncoding mutations for CCLE data
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1
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10
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October 23, 2024
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Clarification on Y-axis height within the same tumor type in expression plot
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1
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15
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October 18, 2024
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CRISPRGeneEffect chromosome arm correction (AC-Chronos)
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1
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11
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October 11, 2024
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Cell lines removed from newer releases
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4
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32
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October 7, 2024
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Need File with gene size or FPKM for CCLE RNA expression
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4
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334
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September 25, 2024
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ERCC spike-ins in RNAseq data
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0
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17
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September 23, 2024
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What's the difference between 'cutaneous melanoma' and 'melanoma'?
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1
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16
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September 11, 2024
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How to plot a specific gene effect vs different cell lines in DepMap?
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1
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64
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September 9, 2024
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Accessing raw sequencing data
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8
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5120
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September 8, 2024
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Contrasting Gene Effects between RNAi and CRISPR of CCN4
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1
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19
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September 4, 2024
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Which one of the expression data is proper for machine learning?
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4
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172
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September 4, 2024
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Problem to map drug info to 24Q2_Extended_Primary_Data_Matrix
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0
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16
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August 23, 2024
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LS180 (ACH-000957) mutations are different between 20Q1 and 23Q4
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1
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12
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August 19, 2024
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LMFI(log2 median fluorescence intensity values)
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0
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20
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July 21, 2024
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Dataset heatmap
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1
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27
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July 19, 2024
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There is a way to map the Cell Line Name to BioPortal Cell Ontology?
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1
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427
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June 20, 2024
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Availability of WGS or WXS data for cell lines
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2
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226
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June 14, 2024
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How should I interpret changes in top co-dependencies across different datasets?
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0
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111
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June 12, 2024
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SRY gene KO is scored in multiple cell lines originating from women
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4
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76
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May 24, 2024
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Is there a threshold in Drug Sensitivity AUC?
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1
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399
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May 10, 2024
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DepMap don't have cell line data for HEK-293?
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4
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257
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May 9, 2024
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Mutations for entire genes missing
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1
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80
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May 8, 2024
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Hash code for each unique file downloaded
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2
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94
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May 2, 2024
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