|
Clarification on Y-axis height within the same tumor type in expression plot
|
|
1
|
15
|
October 18, 2024
|
|
CRISPR screen and RNA-seq
|
|
2
|
34
|
October 11, 2024
|
|
Cell lines removed from newer releases
|
|
4
|
32
|
October 7, 2024
|
|
HSC39 cells
|
|
0
|
6
|
October 6, 2024
|
|
Which one of the expression data is proper for machine learning?
|
|
4
|
172
|
September 4, 2024
|
|
How should I interpret changes in top co-dependencies across different datasets?
|
|
0
|
111
|
June 12, 2024
|
|
Cell line susceptibility to lentiviral infection
|
|
3
|
135
|
April 5, 2024
|
|
Selective dependencies
|
|
1
|
185
|
April 5, 2024
|
|
Viability test used?
|
|
0
|
87
|
April 2, 2024
|
|
Definition of common essential genes
|
|
0
|
584
|
April 2, 2024
|
|
Categorization of Cell Lines by DepMap Release Date
|
|
2
|
166
|
March 7, 2024
|
|
RNA-seq paired with CRISPR screen data?
|
|
1
|
145
|
March 5, 2024
|
|
How to interpret the results about "effect size"
|
|
6
|
2653
|
December 12, 2023
|
|
Where is probability of dependency used?
|
|
3
|
1874
|
October 24, 2023
|
|
Could I access the CRISPR screen log fold change or raw screening data
|
|
1
|
260
|
October 24, 2023
|
|
Some genes have 2 labels; common essential and strongly selective
|
|
1
|
432
|
September 22, 2023
|
|
number of investigated cell lines in CRISPR screens.
|
|
1
|
284
|
August 16, 2023
|
|
Missing CRISPRGeneEffect values in 23Q2 release
|
|
1
|
301
|
June 5, 2023
|
|
ACH001956 removed from 22Q4 entirely
|
|
3
|
312
|
May 1, 2023
|
|
What do the various CRISPR confounders mean?
|
|
1
|
422
|
February 24, 2023
|
|
CRISPRGeneEffect vs CRISPRGenedependency
|
|
1
|
2530
|
February 24, 2023
|
|
Conserved dropout frequency of genes in cell lines derived from different tissues
|
|
2
|
266
|
February 6, 2023
|
|
How are top 100 co-dependencies in a gene webpage determined?
|
|
3
|
776
|
December 15, 2022
|
|
Identification of selectively dependent hits in subgroups of specific cancer cell lines annotated to the same cancer
|
|
0
|
306
|
November 9, 2022
|
|
How to calculate co-dependencies locally?
|
|
1
|
543
|
August 31, 2022
|
|
Gene effect and CERES score
|
|
1
|
1500
|
July 25, 2022
|
|
Expression of fusion genes in CCLE
|
|
1
|
344
|
June 27, 2022
|
|
Discrepancies in mutational status from Cell line Selector and DepMap mutations tab for cancer cell lines
|
|
6
|
1261
|
June 24, 2022
|
|
Calculation of frequency mutated genes
|
|
4
|
381
|
April 22, 2022
|
|
Amplicon sequencing assays for viability barcodes
|
|
2
|
421
|
March 2, 2022
|
