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What's the genome version and gene annotation file used for Depmap bulk RNA-Seq expression estimation?
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1
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31
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November 20, 2024
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IC50 values in PRISM Repurposing 19Q4: Raw or Logarithmic?
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0
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45
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November 17, 2024
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Confirming OmicsCNGene.csv "NaN" Interpretations/Assumptions on the X and Y Chromosome
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1
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26
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November 12, 2024
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Cell line selector - what data does it use for expression?
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1
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47
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November 8, 2024
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Problem with Copy Number data
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2
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75
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November 7, 2024
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DepMap Dependency Scores - Recreation
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2
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110
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November 7, 2024
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Getting dependent cell line list of strongly selective genes from DepMap (CRISPR + Achilles)
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5
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1463
|
February 14, 2022
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Copy_Number_(Absolute) and OmicsAbsoluteCNGene are Different
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1
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107
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October 24, 2024
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Where do i find the the drug tractability data?
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1
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44
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October 24, 2024
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SVs, noncoding mutations for CCLE data
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1
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40
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October 23, 2024
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Ensembl, Gencode versions for DepMap data
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1
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40
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October 23, 2024
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Chemical structures for compounds in PRISM screen
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0
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33
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October 19, 2024
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Clarification on Y-axis height within the same tumor type in expression plot
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1
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23
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October 18, 2024
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Comparing cell lines IC50 (trastuzumab)
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3
|
100
|
October 11, 2024
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Gene copy number search for CRISPR engineering
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1
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81
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October 11, 2024
|
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Error in downloading"CRISPRGeneDependency.csv"24Q2
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2
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30
|
October 11, 2024
|
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CRISPR screen and RNA-seq
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2
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94
|
October 11, 2024
|
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CRISPRGeneEffect chromosome arm correction (AC-Chronos)
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1
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29
|
October 11, 2024
|
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Cell lines removed from newer releases
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4
|
66
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October 7, 2024
|
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HSC39 cells
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0
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13
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October 6, 2024
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Discrepancy between two damaging mutation file from 23Q4
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1
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36
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October 4, 2024
|
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How can I see the change in gene expression for several genes after the KO of one particular Gene
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1
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48
|
October 4, 2024
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How can I access/download large depmap datafiles without losing information?
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2
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39
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October 4, 2024
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Script to calculate gene dependencies
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1
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76
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September 25, 2024
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ERCC spike-ins in RNAseq data
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0
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28
|
September 23, 2024
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Single gene comparison between several cell lines
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0
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41
|
September 19, 2024
|
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Please recommend a user manual
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0
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60
|
September 19, 2024
|
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Number of screened compounds
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3
|
43
|
September 16, 2024
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What's the difference between 'cutaneous melanoma' and 'melanoma'?
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1
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53
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September 11, 2024
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Compound instance
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0
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14
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September 11, 2024
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