|
How to label the cells in DepMap 2.0
|
|
2
|
108
|
July 15, 2025
|
|
Availability of VCF/WGS data for cell line demultiplexing
|
|
4
|
180
|
July 14, 2025
|
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comparison between raw counts and log TPM values
|
|
0
|
86
|
July 10, 2025
|
|
Random forest code
|
|
2
|
198
|
July 1, 2025
|
|
Drug-Target validation using CRISPR and PRISM repurposing dataset
|
|
6
|
277
|
July 1, 2025
|
|
Access to unfiltered cell line VCF files?
|
|
1
|
99
|
June 30, 2025
|
|
How is 'Haematopoietic And Lymphoid' coming as enriched lineages but are absent in the lineage columns of the cell line data?
|
|
1
|
43
|
June 26, 2025
|
|
How to compare essential genes in several cell lines of certain lineage at once?
|
|
1
|
143
|
June 26, 2025
|
|
Question about the naming rule for drugs in Custom Downloads data
|
|
1
|
64
|
June 26, 2025
|
|
WGS data access
|
|
1
|
101
|
June 23, 2025
|
|
Cell line annotations
|
|
2
|
165
|
June 16, 2025
|
|
BAM files from RNA seq
|
|
1
|
92
|
June 13, 2025
|
|
Cannot share reports
|
|
1
|
55
|
June 9, 2025
|
|
Data after CRISPR-Cas9 screening
|
|
2
|
105
|
June 9, 2025
|
|
DepMap Data – Exploring Relevance Beyond Oncology
|
|
0
|
41
|
June 2, 2025
|
|
Some files cannot be downloaded!
|
|
0
|
53
|
May 26, 2025
|
|
NCI-H854 Oncotree cancer type
|
|
1
|
87
|
May 23, 2025
|
|
Data "PRISM Repurposing Public 24Q2" in Custom Downloads
|
|
1
|
177
|
May 23, 2025
|
|
How to Best Analyze DepMap Data for Identifying Cancer Dependencies?
|
|
0
|
341
|
May 23, 2025
|
|
How do we interpret the ssGSEA scores in DepMap?
|
|
1
|
290
|
May 23, 2025
|
|
Prism compound and cell line count
|
|
0
|
56
|
May 10, 2025
|
|
DepMap portal cell line mutation,
|
|
2
|
112
|
May 5, 2025
|
|
Reference genome for mutation data
|
|
1
|
46
|
April 30, 2025
|
|
Batch corrected counts data
|
|
2
|
148
|
April 30, 2025
|
|
Normalization -TMM
|
|
3
|
139
|
April 16, 2025
|
|
Negative goodness of fit
|
|
0
|
28
|
April 8, 2025
|
|
Question about PRISM Drug sensitivity AUC data
|
|
7
|
5288
|
April 8, 2025
|
|
Availability of of RNA-seq bigwig files
|
|
2
|
73
|
April 7, 2025
|
|
24Q2 - PureCN Integer Copy Number for Chr X and Y
|
|
3
|
202
|
April 6, 2025
|
|
Multiple SMILES in secondary-screen-dose-response-curve-parameters.csv
|
|
0
|
32
|
April 4, 2025
|
