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How to mapping the sample IDs in the RNA-Seq RSEM count file to the Model file or cell line names?
|
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1
|
91
|
March 12, 2024
|
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How to find a specific analysis
|
|
1
|
107
|
March 12, 2024
|
|
The meaning of AUC values greater than 1 in the PRISM secondary screen
|
|
2
|
126
|
March 9, 2024
|
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Interpretation of Drug sensitivity AUC and Logfold change value
|
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8
|
4108
|
March 8, 2024
|
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Categorization of Cell Lines by DepMap Release Date
|
|
2
|
109
|
March 7, 2024
|
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HPV status of HNSCC
|
|
1
|
94
|
March 7, 2024
|
|
RNA-seq paired with CRISPR screen data?
|
|
1
|
89
|
March 5, 2024
|
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Determining Copy Number Alterations for Genes/, as boolean, in DepMap Public 22Q2
|
|
1
|
111
|
February 28, 2024
|
|
Bam files from RNA seq data ?
|
|
1
|
122
|
February 16, 2024
|
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Newbie: How to analyze changes in expression levels of a selected gene after knockout of another selected gene?
|
|
2
|
384
|
February 12, 2024
|
|
Context dependencies enriched in.... how analysed?
|
|
2
|
515
|
February 12, 2024
|
|
Is it possible to check which CRISPR sgRNA library was used to screen each cell line
|
|
3
|
110
|
February 5, 2024
|
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Can a threshold be set in the gene effect？
|
|
1
|
168
|
February 2, 2024
|
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Re-distribution of the CCLE data (Licensing)
|
|
1
|
88
|
February 2, 2024
|
|
How to save lists
|
|
1
|
130
|
February 2, 2024
|
|
CCLE_expression data values are different
|
|
1
|
89
|
January 30, 2024
|
|
difference between the results reported on DepMap and on the GDSC website
|
|
1
|
274
|
January 30, 2024
|
|
EWSR1 fusion cancers
|
|
0
|
42
|
January 30, 2024
|
|
Pre-computed association: Proteomics
|
|
1
|
65
|
January 30, 2024
|
|
How to go from unvalidated cell line (e.g. K562) to a DepMap ID (ACH-000551)?
|
|
1
|
96
|
January 26, 2024
|
|
Converting DepMap ID to Cellosaurus ID
|
|
1
|
92
|
January 26, 2024
|
|
Ach-002335_u-ch1
|
|
2
|
95
|
January 23, 2024
|
|
Is there a threshold in Drug Sensitivity AUC?
|
|
0
|
111
|
January 23, 2024
|
|
Somatic mutations: coverage for homozygote reference samples
|
|
1
|
104
|
January 19, 2024
|
|
API endpoints for perturbation and/or expression?
|
|
0
|
73
|
January 18, 2024
|
|
Availability of WGS or WXS data for cell lines
|
|
1
|
108
|
January 18, 2024
|
|
Clarifying the Criteria for Identifying Oncogenic Alterations in DepMap Cell Line Data
|
|
1
|
116
|
January 17, 2024
|
|
Clarifying the Criteria for Identifying Oncogenic Alterations in DepMap Cell Line Data
|
|
1
|
125
|
January 17, 2024
|
|
How to find telomere content in Data Explorer?
|
|
0
|
94
|
January 12, 2024
|
|
Shrinkage of betas to EffectSize / PosteriorMean
|
|
0
|
70
|
January 10, 2024
|
