|
Cancer versus non-cancer dependencies
|
|
4
|
3314
|
December 3, 2021
|
|
Genes excluded in DepMap Reporting
|
|
1
|
293
|
November 13, 2021
|
|
Download processed data just before Ceres/Chronos
|
|
1
|
385
|
October 26, 2021
|
|
Different number of genes in CERES and Chronos gene effect
|
|
2
|
405
|
September 28, 2021
|
|
miRNA and transcripts in 21Q3
|
|
2
|
572
|
September 23, 2021
|
|
Raw Read Counts Accession
|
|
9
|
2301
|
September 23, 2021
|
|
Cas9 activity scores
|
|
2
|
354
|
August 24, 2021
|
|
Can CERES score be comparable across cell lines?
|
|
1
|
443
|
August 13, 2021
|
|
Identify putative drugs and pertubagens that selectively sensitize specific cancer cell lines for translational cancer research
|
|
2
|
595
|
July 17, 2021
|
|
CERES score correlation with cell proliferation
|
|
8
|
6035
|
June 10, 2021
|
|
Zygosity of CRISPR mediated deletion in Achilles
|
|
1
|
323
|
May 3, 2021
|
|
Are DEMETER2 suitable for screening without repliated siRNAs?
|
|
1
|
339
|
April 28, 2021
|
|
Which reference genome is used for aligning raw sequencing data?
|
|
3
|
560
|
April 20, 2021
|
|
Some gene dependency scores are "NA" in DEMETER2 generated matrix
|
|
2
|
461
|
March 18, 2021
|
|
The miRNA data in GeCKO screen
|
|
3
|
458
|
March 17, 2021
|
|
Find "differentially" significant pertubagens that sensitize selectively different cancer cell lines
|
|
4
|
1184
|
March 6, 2021
|
|
Common essential genes
|
|
3
|
2679
|
January 16, 2021
|
|
Question about interpreting Gene Effect
|
|
1
|
1169
|
December 8, 2020
|
|
How is the probability of dependency different from the gene effect score?
|
|
0
|
1394
|
August 13, 2020
|
|
I’m a computationalist and I want gene scores with no copy number corrections or other fancy processing. How can I get them?
|
|
0
|
283
|
August 13, 2020
|
|
What about guides that are in raw_readcounts but aren’t in the guide_gene_map?
|
|
0
|
272
|
August 13, 2020
|
|
What thresholds should I use to decide if a gene is really having a significant effect on a cell line?
|
|
0
|
620
|
August 13, 2020
|
|
What does a positive CERES score mean?
|
|
0
|
1092
|
August 13, 2020
|
|
Why are some cell lines not showing up in the results when certain genes are searched in the combined RNAi dataset?
|
|
0
|
256
|
August 13, 2020
|
|
Is gene dependency correlated with compound effect?
|
|
2
|
461
|
July 8, 2020
|
|
I'm interested in the log fold change data for Achilles. How do I map it to cell lines?
|
|
1
|
1791
|
June 19, 2020
|
