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How to calculate co-dependencies locally?
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1
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581
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August 31, 2022
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Gene effect and CERES score
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1
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1613
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July 25, 2022
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Expression of fusion genes in CCLE
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1
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362
|
June 27, 2022
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Discrepancies in mutational status from Cell line Selector and DepMap mutations tab for cancer cell lines
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6
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1367
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June 24, 2022
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Calculation of frequency mutated genes
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4
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459
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April 22, 2022
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Amplicon sequencing assays for viability barcodes
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2
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430
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March 2, 2022
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Standard for representing CRISPR data, Chronos
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1
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890
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January 25, 2022
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Can DepMap capture the genes which are in the synthetic lethality?
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8
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1724
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January 21, 2022
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Processing of Achilles gene effect dependency matrix for computation of common essential genes with CoRe R package
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2
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544
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January 19, 2022
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Identify conditionally essential genes in clinical subgroups of a specific cancer type
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4
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1482
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January 7, 2022
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Should I take the mean value for cell-line data?
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3
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614
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December 22, 2021
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Validation of CRISPR KO
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1
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505
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December 3, 2021
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Cancer versus non-cancer dependencies
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4
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3794
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December 3, 2021
|
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Genes excluded in DepMap Reporting
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1
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322
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November 13, 2021
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Download processed data just before Ceres/Chronos
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1
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437
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October 26, 2021
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Different number of genes in CERES and Chronos gene effect
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2
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487
|
September 28, 2021
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miRNA and transcripts in 21Q3
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2
|
780
|
September 23, 2021
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Raw Read Counts Accession
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9
|
2578
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September 23, 2021
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Cas9 activity scores
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2
|
398
|
August 24, 2021
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Can CERES score be comparable across cell lines?
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1
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562
|
August 13, 2021
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Identify putative drugs and pertubagens that selectively sensitize specific cancer cell lines for translational cancer research
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2
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696
|
July 17, 2021
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CERES score correlation with cell proliferation
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8
|
6514
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June 10, 2021
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Zygosity of CRISPR mediated deletion in Achilles
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1
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355
|
May 3, 2021
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Are DEMETER2 suitable for screening without repliated siRNAs?
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1
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391
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April 28, 2021
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Which reference genome is used for aligning raw sequencing data?
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3
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611
|
April 20, 2021
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Some gene dependency scores are "NA" in DEMETER2 generated matrix
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2
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552
|
March 18, 2021
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The miRNA data in GeCKO screen
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3
|
508
|
March 17, 2021
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Find "differentially" significant pertubagens that sensitize selectively different cancer cell lines
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4
|
1400
|
March 6, 2021
|
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Common essential genes
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3
|
3191
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January 16, 2021
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Question about interpreting Gene Effect
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1
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1343
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December 8, 2020
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