Standard for representing CRISPR data, Chronos
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1
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831
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January 25, 2022
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Can DepMap capture the genes which are in the synthetic lethality?
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8
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1569
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January 21, 2022
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Processing of Achilles gene effect dependency matrix for computation of common essential genes with CoRe R package
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2
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532
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January 19, 2022
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Identify conditionally essential genes in clinical subgroups of a specific cancer type
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4
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1409
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January 7, 2022
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Should I take the mean value for cell-line data?
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3
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611
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December 22, 2021
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Validation of CRISPR KO
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1
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492
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December 3, 2021
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Cancer versus non-cancer dependencies
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4
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3765
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December 3, 2021
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Genes excluded in DepMap Reporting
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1
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318
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November 13, 2021
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Download processed data just before Ceres/Chronos
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1
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430
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October 26, 2021
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Different number of genes in CERES and Chronos gene effect
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2
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473
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September 28, 2021
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miRNA and transcripts in 21Q3
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2
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687
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September 23, 2021
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Raw Read Counts Accession
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9
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2568
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September 23, 2021
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Cas9 activity scores
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2
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387
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August 24, 2021
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Can CERES score be comparable across cell lines?
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1
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555
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August 13, 2021
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Identify putative drugs and pertubagens that selectively sensitize specific cancer cell lines for translational cancer research
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2
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680
|
July 17, 2021
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CERES score correlation with cell proliferation
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8
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6429
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June 10, 2021
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Zygosity of CRISPR mediated deletion in Achilles
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1
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355
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May 3, 2021
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Are DEMETER2 suitable for screening without repliated siRNAs?
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1
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376
|
April 28, 2021
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Which reference genome is used for aligning raw sequencing data?
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3
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604
|
April 20, 2021
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Some gene dependency scores are "NA" in DEMETER2 generated matrix
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2
|
547
|
March 18, 2021
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The miRNA data in GeCKO screen
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3
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504
|
March 17, 2021
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Find "differentially" significant pertubagens that sensitize selectively different cancer cell lines
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4
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1376
|
March 6, 2021
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Common essential genes
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3
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3119
|
January 16, 2021
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Question about interpreting Gene Effect
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1
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1321
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December 8, 2020
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How is the probability of dependency different from the gene effect score?
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0
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1944
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August 13, 2020
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I’m a computationalist and I want gene scores with no copy number corrections or other fancy processing. How can I get them?
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0
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301
|
August 13, 2020
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What about guides that are in raw_readcounts but aren’t in the guide_gene_map?
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0
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287
|
August 13, 2020
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What thresholds should I use to decide if a gene is really having a significant effect on a cell line?
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0
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735
|
August 13, 2020
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What does a positive CERES score mean?
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0
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1229
|
August 13, 2020
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Why are some cell lines not showing up in the results when certain genes are searched in the combined RNAi dataset?
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0
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280
|
August 13, 2020
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