Hi, I’m trying to identify cell lines dependant or not on my gene of interest. From the Overview, I can see 174 cell lines are dependent, but is there a way I can get a list of these cell lines? Also, from my understanding of the graphs, the lowest the CERES value (even <-1), the more dependent is the cell line. Is that correct?Thanks in advance for your help.
Thank you for your question and sorry for the late reply. Most of the team is on holiday.
If you go to the gene page for your favorite gene, go to the “Perturbation Effects” tab. From there, you will find a little download icon (highlighted in the blue circle). This should suit your needs.
And yes, negative CERES values indicate dependency. The more negative, the more dependent.
That’s very helpful. Thanks a lot!