Duplications of modelIDs???.... 23Q2

Issues and Bugs
1

Hi!
Am I missing to explain myself something here???.. can ModelID be duplicated.
from “Omicsprofiles.csv” from 23Q2

ProfileID,ModelConditionID,ModelID,Datatype,WESKit
PR-lqUArB,MC-000029-BMZc,ACH-000029,rna,NA
PR-pOBrMJ,MC-000029-BMZc,ACH-000029,rna,NA
PR-cQHv2j,MC-000029-BMZc,ACH-000029,wes,ICE
PR-6E5fvI,MC-000095-UcYl,ACH-000095,rna,NA
PR-9bHyjI,MC-000095-UcYl,ACH-000095,rna,NA
PR-7mztNC,MC-000095-UcYl,ACH-000095,wes,ICE
PR-dlwhbG,MC-000143-xMKb,ACH-000143,rna,NA
PR-eLOZCF,MC-000143-xMKb,ACH-000143,rna,NA
PR-c91Su5,MC-000143-xMKb,ACH-000143,wes,ICE
PR-by8s63,MC-000206-Jmpg,ACH-000206,rna,NA
PR-xissjH,MC-000206-Jmpg,ACH-000206,rna,NA
PR-gJ2xo3,MC-000206-Jmpg,ACH-000206,wes,ICE
PR-DjTYZp,MC-000328-gA4f,ACH-000328,rna,NA
PR-S409MD,MC-000328-gA4f,ACH-000328,rna,NA
PR-CpGcTp,MC-000328-gA4f,ACH-000328,wes,ICE
PR-ZJC2Tm,MC-000337-VmHG,ACH-000337,rna,NA
PR-zvd6KC,MC-000337-VmHG,ACH-000337,rna,NA
PR-A4KXo8,MC-000337-VmHG,ACH-000337,wes,ICE
PR-gjJwnu,MC-000337-UoC5,ACH-000337,wes,AGILENT
PR-HCodtv,MC-000455-QvVM,ACH-000455,rna,NA
PR-JWn3XA,MC-000455-QvVM,ACH-000455,rna,NA
PR-WVHySQ,MC-000455-QvVM,ACH-000455,wes,ICE
PR-8iDtve,MC-000468-c6hY,ACH-000468,rna,NA
PR-qf7nCW,MC-000468-c6hY,ACH-000468,rna,NA
PR-FNigiY,MC-000468-c6hY,ACH-000468,wes,AGILENT
PR-aOml9R,MC-000517-kcbL,ACH-000517,rna,NA
PR-i9CVhO,MC-000517-kcbL,ACH-000517,rna,NA
PR-ENi2ee,MC-000517-kcbL,ACH-000517,wes,AGILENT
PR-Q8g8M0,MC-000532-NN9r,ACH-000532,rna,NA
PR-t6ctGM,MC-000532-NN9r,ACH-000532,rna,NA
PR-98T820,MC-000532-DVgv,ACH-000532,wes,AGILENT
PR-uBG2IJ,MC-000532-NN9r,ACH-000532,wes,AGILENT
PR-zL9R8E,MC-000532-NN9r,ACH-000532,wgs,NA
PR-1hnFd4,MC-000556-YK2Z,ACH-000556,rna,NA
PR-Iug0GM,MC-000556-YK2Z,ACH-000556,rna,NA
PR-6ldUF4,MC-000556-MsyC,ACH-000556,wes,AGILENT
PR-e0e2Uf,MC-000556-YK2Z,ACH-000556,wes,ICE
PR-3ATZmJ,MC-000597-RDyO,ACH-000597,rna,NA
PR-w00MaJ,MC-000597-RDyO,ACH-000597,rna,NA
PR-vuRAsN,MC-000597-RDyO,ACH-000597,wes,ICE
PR-hs3wNI,MC-000700-mndS,ACH-000700,rna,NA
PR-uQ6qid,MC-000700-mndS,ACH-000700,rna,NA
PR-oe5b6J,MC-000700-mndS,ACH-000700,wes,ICE
PR-CHQ9Av,MC-000931-3a7D,ACH-000931,rna,NA
PR-k0J8JP,MC-000931-3a7D,ACH-000931,rna,NA
PR-GpA8Fy,MC-000931-3a7D,ACH-000931,SNParray,NA
PR-eCRyEu,MC-000975-PUD5,ACH-000975,rna,NA
PR-s28NRl,MC-000975-PUD5,ACH-000975,rna,NA
PR-ICWGyU,MC-000975-PUD5,ACH-000975,wes,ICE
PR-RJkk8B,MC-001192-OhhV,ACH-001192,rna,NA
PR-V4rEyG,MC-001192-OhhV,ACH-001192,rna,NA
PR-MD14e2,MC-001192-V0nP,ACH-001192,wes,AGILENT
PR-npwIay,MC-001192-OhhV,ACH-001192,wes,AGILENT

The “ProfileID” data seems to be present in “OmicsExpressionGenesExpectedCountProfile.csv”.

Thanks

2

Hi,

Thanks for reaching out! We started releasing profile-level datasets in order to allow users to access replicates within the same model if they wish. In terms of ID mapping, Omicsprofiles.csv includes all the profiles that we are allowed to release, which can include multiple profiles with the same sequencing method under the same model ID. However, if you need information on which profiles are selected in the model-level datasets, OmicsDefaultModelProfiles.csv should be the one you are looking for.

Hope this helps!
Simone