Hi DepMap Team, Is it possible to download the the binary mutation status of all genes per cell line? This data would match Mutation Public 20Q3. Similar to the data from CCLE (CCLE_MUT_CNA_AMP_DEL_binary_Revealer.gct). Thanks in advance.

Binary Calls for Mutations

jnoorbak February 22, 2021, 5:57pm 4

Please take a look at this post and see if it answers your question.

Topic		Replies	Views
Is there a dataset where I can find cell lines with specific mutations? Q&A	1	491	March 1, 2022
Regarding Mutations Q&A	1	62	July 19, 2024
Are "CCLE Copy Number Variation (CNV) Data" and "CCLE Mutation Data" still available for download? Issues and Bugs	1	318	June 5, 2023
Discrepancies in mutational status from Cell line Selector and DepMap mutations tab for cancer cell lines Issues and Bugs portal , genetic-screens , omics	6	1386	June 24, 2022
Missing CCLE 2019 mutation data download? Report an Issue portal , data	3	35	July 31, 2025