I just had a quick question–is there any way to see the associations between particular cell line expression levels and the transcripts of a particular gene of interest? Ordinarily in the Data Explorer, we can only see how a particular gene relates to expression in different cell lines. I’m interested in how expression varies among isoforms. Thanks!
No unfortunately, at this time we do not load the transcript level data into the portal’s database, so we can’t use the portal to ask any transcript level questions.
Today, one would have to download the transcript dataset we publish and do the analysis outside of the portal.