# Bioinformatics pipelines

**URL:** <https://forum.depmap.org/t/bioinformatics-pipelines/103>\
**Category:** Q&A\
**Tags:** omics\
**Created:** [July 27, 2020, 1:48pm UTC](https://forum.depmap.org/t/bioinformatics-pipelines/103 "2020-07-27T13:48:23Z")\
**Posts on this page:** 2\
**Page:** 1

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**Author:** ![jnoorbak](https://yyz1.discourse-cdn.com/flex035/user_avatar/forum.depmap.org/jnoorbak/32/12_2.png) [@jnoorbak](https://forum.depmap.org/u/jnoorbak)\
**Post date:** [July 27, 2020, 1:48pm UTC](https://forum.depmap.org/t/bioinformatics-pipelines/103/1 "2020-07-27T13:48:23Z")

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User have asked us:  
Where can I find detailed documentation on your bioinformatic pipelines used for computing the copy number ratios, gene expression, and mutation calls?

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**Author:** ![jnoorbak](https://yyz1.discourse-cdn.com/flex035/user_avatar/forum.depmap.org/jnoorbak/32/12_2.png) [@jnoorbak](https://forum.depmap.org/u/jnoorbak)\
**Post date:** [July 27, 2020, 1:50pm UTC](https://forum.depmap.org/t/bioinformatics-pipelines/103/2 "2020-07-27T13:50:38Z")

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You can find our pipelines and their documentation [here](https://github.com/broadinstitute/ccle_processing).