# Resolved Issues

**URL:** https://forum.depmap.org/c/issues/resolved-issues/11.md

[Latest](https://forum.depmap.org/latest.md) · [Categories](https://forum.depmap.org/categories.md) · [Tags](https://forum.depmap.org/tags.md)

---

## [About the Resolved Issues category](https://forum.depmap.org/t/about-the-resolved-issues-category/23)

<div class="topic-metadata">

**Author:** [@aviad](https://forum.depmap.org/u/aviad)\
**Replies:** 0

</div>

---

## [Nov 23rd Portal outage resolved](https://forum.depmap.org/t/nov-23rd-portal-outage-resolved/2093)

<div class="topic-metadata">

**Author:** [@pmontgom](https://forum.depmap.org/u/pmontgom)\
**Replies:** 4\
**Last updated:** [June 29, 2026, 2:21pm UTC](https://forum.depmap.org/t/nov-23rd-portal-outage-resolved/2093 "2026-06-29T14:21:21Z")

</div>

Upon returning from the thanksgiving holiday, I discovered there were numerous reports of failures from across the DepMap Portal. I believe I’ve rectified the problem at this time. The root cause was that one of the bac…

---

## [Issue with custom analysis volcano plot in the 24Q2 portal update](https://forum.depmap.org/t/issue-with-custom-analysis-volcano-plot-in-the-24q2-portal-update/3324)

<div class="topic-metadata">

**Author:** [@pmontgom](https://forum.depmap.org/u/pmontgom)\
**Replies:** 0\
**Last updated:** [June 6, 2024, 8:58pm UTC](https://forum.depmap.org/t/issue-with-custom-analysis-volcano-plot-in-the-24q2-portal-update/3324 "2024-06-06T20:58:44Z")

</div>

Today, a user reported an inconsistency between correlations reported by the volcano plot and the scatter plot in DE2. Upon investigating we discovered a bug stemming from the way that data was exchanged between two com…

---

## [Unexpected error. If you get this error consistently, please contact us with a screenshot and the actions that lead to this error.](https://forum.depmap.org/t/unexpected-error-if-you-get-this-error-consistently-please-contact-us-with-a-screenshot-and-the-actions-that-lead-to-this-error/2087)

<div class="topic-metadata">

**Author:** [@weiyue1](https://forum.depmap.org/u/weiyue1)\
**Replies:** 1\
**Last updated:** [November 28, 2022, 2:51pm UTC](https://forum.depmap.org/t/unexpected-error-if-you-get-this-error-consistently-please-contact-us-with-a-screenshot-and-the-actions-that-lead-to-this-error/2087 "2022-11-28T14:51:25Z")

</div>

---

## [Different number of genes in CERES and Chronos gene effect](https://forum.depmap.org/t/different-number-of-genes-in-ceres-and-chronos-gene-effect/912)

<div class="topic-metadata">

**Author:** [@jhcook](https://forum.depmap.org/u/jhcook)\
**Replies:** 2\
**Last updated:** [September 28, 2021, 6:12pm UTC](https://forum.depmap.org/t/different-number-of-genes-in-ceres-and-chronos-gene-effect/912 "2021-09-28T18:12:15Z")

</div>

Hello, I believe there is a bug somewhere in the processing of the gene effects from CERES and Chronos because there are 252 genes in CERES that are not in Chronos. If this is not a mistake, can you explain why those ge…

---

## [Cas9 activity scores](https://forum.depmap.org/t/cas9-activity-scores/847)

<div class="topic-metadata">

**Author:** [@rkarnik](https://forum.depmap.org/u/rkarnik)\
**Replies:** 2\
**Last updated:** [August 24, 2021, 5:49pm UTC](https://forum.depmap.org/t/cas9-activity-scores/847 "2021-08-24T17:49:28Z")

</div>

In the sample\_info.csv file, I see a cas9\_activity column. The description says it is the percentage of GFP-positive cells, which is the reverse of cas9\_activity, if I correctly understand the assay being used. Is that t…

---

## [Copy Number data wrong](https://forum.depmap.org/t/copy-number-data-wrong/244)

<div class="topic-metadata">

**Author:** [@dannyM](https://forum.depmap.org/u/dannyM)\
**Replies:** 2\
**Last updated:** [October 14, 2020, 7:02am UTC](https://forum.depmap.org/t/copy-number-data-wrong/244 "2020-10-14T07:02:27Z")

</div>

Hi there, I’m using the R depmap package to access the data. Using the function depmap\_copyNumer() results in the wrong table…not getting the copy number datay…I think it is the metadata table…so maybe wrong linked. Ch…
